repeatmasker | RepeatMasker Home Page

Keyword	CPC	PCC	Volume	Score	Length of keyword
repeatmasker	0.55	0.6	406	78	12

Keyword	CPC	PCC	Volume	Score
repeatmasker	1.86	0.8	4277	24
repeatmasker github	1.82	0.4	6113	90
repeatmasker conda	0.36	0.1	2400	8
repeatmasker install	0.55	0.5	7171	71
repeatmasker web server	1.31	0.1	408	10
repeatmasker dfam	0.14	0.2	7334	5
repeatmasker species	0.07	0.4	7713	55
repeatmasker open-4.0	0.49	0.9	9261	94

Search Results related to repeatmasker on Search Engine

RepeatMasker Home Page
repeatmasker.org

https://www.repeatmasker.org/

WEBRepeatMasker is a program that screens DNA sequences for interspersed repeats and low complexity DNA sequences. The output of the program is a detailed annotation of the repeats that are present in the query sequence as well as a modified version of the query sequence in which all the annotated repeats have been masked (default: replaced by Ns).

DA: 65 PA: 32 MOZ Rank: 18

GitHub - rmhubley/RepeatMasker: RepeatMasker is a program …
github.com

https://github.com/rmhubley/RepeatMasker

WEBRepeatMasker is a program that screens DNA sequences for interspersed repeats and low complexity DNA sequences. The output of the program is a detailed annotation of the repeats that are present in the query sequence as well as a modified version of the query sequence in which all the annotated repeats have been masked (default: replaced by Ns).

DA: 32 PA: 84 MOZ Rank: 23

Download Page - RepeatMasker
repeatmasker.org

https://www.repeatmasker.org/RepeatMasker/

WEBRepeatMasker Download. Prerequisites. Unix system with perl 5.8.0 or higher installed. Python 3 and the h5py python library. See https://docs.h5py.org/en/latest/build.html for installation instructions. Sequence Search Engine RepeatMasker uses a sequence search engine to perform it's search for repeats. Currently Cross_Match, RMBlast and ...

DA: 45 PA: 87 MOZ Rank: 20

RepeatMasker Documentation
repeatmasker.org

https://www.repeatmasker.org/webrepeatmaskerhelp.html

WEBInterpreting Results | RepeatMasker uses| Sensitivity | Selectivity | Repeat databases | References | Changes. RepeatMasker is a program that screens DNA sequences for interspersed repeats and low complexity DNA sequences.

DA: 7 PA: 64 MOZ Rank: 14

Using and Understanding RepeatMasker | SpringerLink
springer.com

https://link.springer.com/protocol/10.1007/978-1-61779-603-6_2

WEBJan 1, 2012 · RepeatMasker is a free application created by A.R.A Smith in 1998. The latest version 3-2-9 is available since January 7, 2010. RepeatMasker screens one or more genomic sequences in FASTA format and detects transposable elements, satellites and low-complexity DNA sequences. It is the most use d software for …

DA: 11 PA: 38 MOZ Rank: 60

RepeatMasker Documentation - Iowa State University
iastate.edu

https://www.genome.iastate.edu/bioinfo/resources/manuals/RepeatMasker.html

WEBRepeatMasker is a program that screens DNA sequences for interspersed. repeats and low complexity DNA sequences. The output of the program is. a detailed annotation of the repeats that are present in the query. sequence as well as a …

DA: 14 PA: 89 MOZ Rank: 14

Using and understanding RepeatMasker - PubMed
nih.gov

https://pubmed.ncbi.nlm.nih.gov/22367864/

WEBRepeatMasker is a program that screens DNA sequences for interspersed repeats and low-complexity DNA sequences. In this chapter, we present the procedure to routinely use this program on a personal computer.

DA: 73 PA: 96 MOZ Rank: 17

Repetitive DNA sequence detection and its role in the human …
nature.com

https://www.nature.com/articles/s42003-023-05322-y

WEBSep 19, 2023 · As described, RepeatMasker (https://www.repeatmasker.org/) is a robust detection and masking framework based on homology searching. The input of RepeatMasker are the genome to be annotated...

DA: 76 PA: 78 MOZ Rank: 62

Genome Annotation / Hands-on: Masking repeats with RepeatMasker
galaxyproject.org

https://training.galaxyproject.org/training-material/topics/genome-annotation/tutorials/repeatmasker/tutorial.html

WEBNov 29, 2021 · It means RepeatMasker will identify very common repeats found in many organisms. For more precise results, you can consider selecting a species closer to the one you analyse in the drop down list, or using other more advanced tools like RepeatModeler.

DA: 76 PA: 97 MOZ Rank: 84

Galaxy Training: Masking repeats with RepeatMasker
galaxians.org

https://hexylena.galaxians.org/training-material/topics/genome-annotation/tutorials/repeatmasker/tutorial.html

WEBJun 1, 2019 · RepeatMasker Tool: toolshed.g2.bx.psu.edu/repos/bgruening/repeat_masker/repeatmasker_wrapper/4.1.2-p1+ galaxy 1 with the following parameters: param-file “Genomic DNA ”: genome_raw.fasta (Input dataset) “Repeat library source”: DFam (curated only, bundled with RepeatMasker) “Select species name from a list?”: Yes

DA: 72 PA: 91 MOZ Rank: 20